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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40282.1Pfam:pfam01464 Transglycosylase SLT domain. (284 aa)    
Predicted Functional Partners:
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
       0.786
AMS41721.1
Pfam:pfam01464 Transglycosylase SLT domain.
  
     0.606
AMS40280.1
Hypothetical protein.
       0.518
AMS41036.1
Pfam:pfam00006 ATP synthase alpha/beta family, nucleotide-binding domain.
  
  
 0.507
fliE
Hypothetical protein; Pfam:pfam02049 Flagellar hook-basal body complex protein FliE.
  
  
 0.500
AMS41012.1
Pfam:pfam07559 Flagellar basal body protein FlaE.
  
  
 0.447
AMS41040.1
Pfam:pfam01052 Surface presentation of antigens (SPOA).
  
    0.433
AMS42540.1
Type IV / vi secretion system protein, dotu family; Pfam:pfam09850 Uncharacterized protein conserved in bacteria (DUF2077).
 
  
 0.429
AMS42529.1
Membrane protein; Pfam:pfam09850 Uncharacterized protein conserved in bacteria (DUF2077).
 
  
 0.426
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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