STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40316.1Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (391 aa)    
Predicted Functional Partners:
AMS40315.1
Pfam:pfam00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
 0.994
AMS41786.1
Phosphoserine phosphatase; Pfam:pfam00702 haloacid dehalogenase-like hydrolase.
  
 
 0.960
AMS43730.1
Pfam:pfam14821 Threonine synthase N terminus.
  
 0.955
AMS43989.1
Threonine synthase-like protein; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme.
   
 0.939
AMS42370.1
Cysteine synthase; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme.
 
 
 0.926
pdxA
4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).
     
 0.918
AMS39012.1
Cysteine synthase; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme.
  
 
 0.916
AMS40074.1
Pyridoxal-5'-phosphate-dependent protein subunit beta; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme.
  
 
 0.916
AMS43990.1
Hypothetical protein; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme.
  
 
 0.916
AMS44382.1
Pfam:pfam00800 Prephenate dehydratase.
 
  
 0.784
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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