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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40329.1TolA, TolA protein. (356 aa)    
Predicted Functional Partners:
exbD_2
Cell division and transport-associated protein TolR; Pfam:pfam02472 Biopolymer transport protein ExbD/TolR.
  
 
 0.971
tolQ
Biopolymer transporter ExbB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.952
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.882
AMS39112.1
Hypothetical protein; Pfam:pfam02472 Biopolymer transport protein ExbD/TolR.
  
 
 0.879
AMS39135.1
TonB-dependent receptor plug; Pfam:pfam00593 TonB dependent receptor.
  
 
 0.809
AMS39483.1
Hypothetical protein; Pfam:pfam00593 TonB dependent receptor.
  
 
 0.809
AMS42008.1
Pfam:pfam07715 TonB-dependent Receptor Plug Domain.
  
 
 0.809
AMS39111.1
Hypothetical protein; Pfam:pfam01618 MotA/TolQ/ExbB proton channel family.
  
 
 0.803
AMS39116.1
Pfam:pfam00593 TonB dependent receptor.
   
 
 0.788
AMS43437.1
Molecular chaperone SurA; Pfam:pfam09312 SurA N-terminal domain.
 
  
 0.751
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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