STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40334.1Pfam:pfam00150 Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family. (413 aa)    
Predicted Functional Partners:
AMS39743.1
Pfam:pfam03190 Protein of unknown function, DUF255.
   
 
 0.803
AMS39425.1
Hypothetical protein.
  
 
 
 0.783
AMS39377.1
Pfam:pfam13160 Protein of unknown function (DUF3995).
  
     0.679
AMS43776.1
Hypothetical protein; Pfam:pfam01183 Glycosyl hydrolases family 25.
  
   
 0.667
AMS42793.1
Kinesin.
  
     0.632
AMS41877.1
Pfam:pfam00535 Glycosyl transferase family 2.
 
     0.621
AMS39649.1
Hypothetical protein; Pfam:pfam07478 D-ala D-ala ligase C-terminus.
  
     0.616
AMS44172.1
Hypothetical protein.
  
 
 
 0.597
AMS42261.1
Pfam:pfam05036 Sporulation related domain.
  
     0.595
AMS44125.1
Hypothetical protein; Pfam:pfam13692 Glycosyl transferases group 1.
 
     0.592
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.