Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40379.1Pfam:pfam03741 Integral membrane protein TerC family. (251 aa)    
Predicted Functional Partners:
AMS41423.1
DNA-binding protein; Pfam:pfam01595 Domain of unknown function DUF21.
    
 0.905
AMS40636.1
CBS domain containing protein; Pfam:pfam03471 Transporter associated domain.
 
      0.840
AMS40380.1
Metallophosphoesterase; Pfam:pfam13277 YmdB-like protein.
       0.522
AMS40381.1
Pfam:pfam01812 5-formyltetrahydrofolate cyclo-ligase family; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.465
AMS40378.1
Pfam:pfam03796 DnaB-like helicase C terminal domain.
     
 0.442
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
    0.420
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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