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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40390.1Hypothetical protein; Pfam:pfam00296 Luciferase-like monooxygenase. (450 aa)    
Predicted Functional Partners:
AMS40389.1
Hypothetical protein; Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
    0.799
AMS43880.1
FMN reductase; Pfam:pfam03358 NADPH-dependent FMN reductase.
 
 
 0.759
AMS41829.1
Hypothetical protein; Pfam:pfam00296 Luciferase-like monooxygenase.
  
     0.743
AMS40392.1
FMN reductase; Pfam:pfam03358 NADPH-dependent FMN reductase.
  
 
 0.556
AMS40391.1
Hypothetical protein; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
       0.539
AMS40388.1
Hypothetical protein.
       0.485
AMS43008.1
Vanillate O-demethylase oxidoreductase; Pfam:pfam00111 2Fe-2S iron-sulfur cluster binding domain.
 
  
 0.480
AMS42900.1
Monooxygenase; Pfam:pfam01494 FAD binding domain.
  
  
 0.476
AMS40610.1
Oxidoreductase; Pfam:pfam00111 2Fe-2S iron-sulfur cluster binding domain.
 
  
 0.424
AMS42591.1
Pfam:pfam01613 Flavin reductase like domain.
 
  
 0.409
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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