Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40393.1Pfam:pfam10073 Uncharacterized protein conserved in bacteria (DUF2312); Belongs to the UPF0335 family. (86 aa)    
Predicted Functional Partners:
AMS41771.1
Hypothetical protein; Pfam:pfam04386 Stringent starvation protein B.
  
   
 0.801
AMS40437.1
Putative cytoplasmic protein; Pfam:pfam06242 Protein of unknown function (DUF1013).
  
   
 0.783
AMS38952.1
Hypothetical protein; Pfam:pfam06347 Bacterial SH3 domain.
  
     0.746
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.746
AMS39631.1
Pfam:pfam13417 Glutathione S-transferase, N-terminal domain.
  
     0.743
AMS39697.1
LuxR family transcriptional regulator; Pfam:pfam12705 PD-(D/E)XK nuclease superfamily.
  
     0.742
AMS43432.1
Pfam:pfam04364 DNA polymerase III chi subunit, HolC.
  
     0.739
atpF
F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
   
 0.717
AMS39696.1
Hypothetical protein; Pfam:pfam13361 UvrD-like helicase C-terminal domain; Belongs to the helicase family. UvrD subfamily.
  
     0.701
rpsU
Pfam:pfam01165 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
     0.672
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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