STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40409.1Pfam:pfam01022 Bacterial regulatory protein, arsR family. (87 aa)    
Predicted Functional Partners:
AMS43021.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
  
     0.759
AMS42499.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
  
     0.748
AMS40375.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
  
     0.730
AMS44219.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
  
     0.715
AMS41494.1
Putative glutathione S-transferase-related transme mbrane protein; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
 
    0.635
AMS41446.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
  
     0.614
AMS44218.1
Pfam:pfam13630 SdpI/YhfL protein family.
 
    0.604
AMS40410.1
MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily.
       0.561
AMS44278.1
Polyketide cyclase; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
 
    0.536
AMS39810.1
Hypothetical protein; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
 
    0.518
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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