Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMS40432.1Hypothetical protein; Pfam:pfam00501 AMP-binding enzyme. (528 aa)    
Predicted Functional Partners:
AMS42554.1
Pfam:pfam00106 short chain dehydrogenase.
 
  0.950
AMS42594.1
Hypothetical protein; Pfam:pfam00501 AMP-binding enzyme.
  
  
 
0.900
AMS42559.1
Hypothetical protein; Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 
 0.783
AMS42599.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
 
 
 0.752
AMS42598.1
Hypothetical protein; Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 
 0.695
AMS43879.1
Pfam:pfam08028 Acyl-CoA dehydrogenase, C-terminal domain.
 
 
 0.632
AMS42573.1
Hypothetical protein.
  
 
 0.617
AMS40420.1
Lipid-transfer protein.
 
 
 0.603
AMS44233.1
Pfam:pfam12806 Acetyl-CoA dehydrogenase C-terminal like.
 
 
 0.596
AMS42600.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family.
 
 
 0.572
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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