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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40439.1CMP deaminase; Pfam:pfam00383 Cytidine and deoxycytidylate deaminase zinc-binding region. (156 aa)    
Predicted Functional Partners:
hisE
Pfam:pfam01503 Phosphoribosyl-ATP pyrophosphohydrolase.
   
  
 0.592
AMS38988.1
Peptidase M22; Pfam:pfam00814 Glycoprotease family.
 
  
 0.514
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.481
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.475
AMS41866.1
Biotin; Pfam:pfam03099 Biotin/lipoate A/B protein ligase family.
  
    0.462
ddl
Hypothetical protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
    0.444
AMS41899.1
P-nitrobenzoate reductase NfnB; Pfam:pfam00881 Nitroreductase family.
 
    0.442
AMS41226.1
Hypothetical protein; Pfam:pfam08279 HTH domain.
   
    0.434
AMS39658.1
Lactoylglutathione lyase; Pfam:pfam12681 Glyoxalase-like domain.
  
    0.406
AMS40612.1
Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
    0.400
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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