STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40458.1Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain. (107 aa)    
Predicted Functional Partners:
AMS40457.1
Hypothetical protein; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
 
    0.921
AMS40455.1
Histidine kinase; Pfam:pfam08818 Domain of unknown function (DU1801).
 
     0.781
AMS40456.1
Membrane protein.
       0.726
AMS44219.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
  
     0.665
AMS40375.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
  
     0.664
AMS44218.1
Pfam:pfam13630 SdpI/YhfL protein family.
 
    0.605
AMS41446.1
ArsR family transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
  
     0.557
AMS41494.1
Putative glutathione S-transferase-related transme mbrane protein; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
 
    0.527
AMS40459.1
Membrane protein; Pfam:pfam01145 SPFH domain / Band 7 family.
       0.488
AMS39810.1
Hypothetical protein; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
 
    0.427
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.