Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40518.125 kDa outer-membrane immunogenic protein; Pfam:pfam13505 Outer membrane protein beta-barrel domain. (224 aa)    
Predicted Functional Partners:
AMS39181.1
Pfam:pfam06620 Protein of unknown function (DUF1150).
  
     0.753
AMS43553.1
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.745
AMS42326.1
Hypothetical protein.
  
     0.726
AMS43552.1
Hypothetical protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.725
AMS43020.1
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.712
AMS43749.1
Pfam:pfam06776 Invasion associated locus B (IalB) protein.
 
     0.698
AMS43147.1
Hypothetical protein; Pfam:pfam10276 Zinc-finger domain.
  
     0.652
AMS39768.1
Pfam:pfam04241 Protein of unknown function (DUF423).
  
     0.642
AMS44204.1
Membrane protein.
  
     0.613
AMS40486.1
Hypothetical protein; Pfam:pfam13747 Domain of unknown function (DUF4164).
  
     0.597
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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