Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AMS40536.1Pfam:pfam07536 HWE histidine kinase. (336 aa)    
Predicted Functional Partners:
AMS40538.1
Chemotaxis protein CheY; Pfam:pfam00072 Response regulator receiver domain.
 
   
 0.899
AMS40540.1
Histidine kinase.
 
   
 0.776
AMS40539.1
RNA polymerase sigma factor; Pfam:pfam08281 Sigma-70, region 4; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.732
AMS40547.1
Hypothetical protein; Pfam:pfam05239 PRC-barrel domain.
 
     0.642
AMS39212.1
Pfam:pfam10116 Protein required for attachment to host cells.
 
     0.612
AMS39774.1
Pfam:pfam06823 Protein of unknown function (DUF1236).
  
     0.604
AMS40537.1
Hypothetical protein.
 
   
 0.602
AMS39049.1
Pfam:pfam00072 Response regulator receiver domain.
 
   
 0.592
AMS40535.1
Hypothetical protein.
       0.557
AMS39298.1
General stress protein.
  
     0.547
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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