Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (363 aa)    
Predicted Functional Partners:
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 0.998
AMS42948.1
UDP-phosphate glucose phosphotransferase; Pfam:pfam02397 Bacterial sugar transferase.
  
  
 0.981
AMS39984.1
Exopolysaccharide biosynthesis protein; Pfam:pfam02397 Bacterial sugar transferase.
  
  
 0.750
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.
 
      0.715
AMS43640.1
Mannose-1-phosphate guanylyltransferase; Pfam:pfam07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.701
AMS39999.1
Hypothetical protein; Pfam:pfam13614 AAA domain.
  
  
 0.691
AMS42945.1
Exopolysaccharide transporter; Pfam:pfam02706 Chain length determinant protein.
  
  
 0.691
AMS43423.1
Alpha-1,2-fucosyltransferase; Pfam:pfam01531 Glycosyl transferase family 11.
 
   
 0.612
cysN
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.582
AMS44207.1
Hypothetical protein; Pfam:pfam00535 Glycosyl transferase family 2.
 
  
 0.501
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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