Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40566.1Hypothetical protein; Pfam:pfam00459 Inositol monophosphatase family. (292 aa)    
Predicted Functional Partners:
AMS41073.1
Inositol 2-dehydrogenase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
    
 0.903
AMS40565.1
Hypothetical protein; Pfam:pfam13419 Haloacid dehalogenase-like hydrolase.
 
    0.812
AMS40564.1
Hypothetical protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.
 
     0.702
AMS40563.1
ABC transporter substrate-binding protein.
 
     0.630
AMS40568.1
Pfam:pfam00459 Inositol monophosphatase family.
 
    
0.619
AMS40561.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
     0.589
nusB
Transcription antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
  
 
 0.556
nusA
Transcription elongation factor NusA; Participates in both transcription termination and antitermination.
   
   0.516
nusG
Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.
   
 
 0.512
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.466
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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