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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40568.1Pfam:pfam00459 Inositol monophosphatase family. (278 aa)    
Predicted Functional Partners:
AMS41073.1
Inositol 2-dehydrogenase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
    
 0.904
cysQ
3'-5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
 
   
 0.776
AMS40569.1
Hypothetical protein; Pfam:pfam00782 Dual specificity phosphatase, catalytic domain.
     
 0.675
AMS40566.1
Hypothetical protein; Pfam:pfam00459 Inositol monophosphatase family.
 
    
0.620
AMS40570.1
Pfam:pfam00149 Calcineurin-like phosphoesterase.
     
 0.586
nusB
Transcription antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
  
 
 0.535
AMS40565.1
Hypothetical protein; Pfam:pfam13419 Haloacid dehalogenase-like hydrolase.
  
    0.511
AMS40564.1
Hypothetical protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.
 
     0.482
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
   0.460
AMS40561.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
     0.456
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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