STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40581.1Hypothetical protein; Pfam:pfam00462 Glutaredoxin. (87 aa)    
Predicted Functional Partners:
AMS40580.1
Hypothetical protein; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
 
  
 0.872
AMS40582.1
ATPase; Pfam:pfam00122 E1-E2 ATPase.
 
 
 
 0.823
AMS39133.1
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.808
AMS42182.1
Ribonucleotide-diphosphate reductase subunit alpha; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
 0.808
secB
Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
  
 0.683
AMS40583.1
Hypothetical protein; Pfam:pfam00403 Heavy-metal-associated domain.
 
   
 0.657
AMS40579.1
Hypothetical protein.
       0.642
AMS40578.1
Hypothetical protein; Pfam:pfam07731 Multicopper oxidase.
 
   
 0.616
AMS43322.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.493
AMS42258.1
Heme biosynthesis protein HemY; Pfam:pfam01521 Iron-sulphur cluster biosynthesis; Belongs to the HesB/IscA family.
  
  
 0.478
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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