Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40588.1Pfam:pfam03626 Prokaryotic Cytochrome C oxidase subunit IV. (120 aa)    
Predicted Functional Partners:
AMS40586.1
Pfam:pfam00510 Cytochrome c oxidase subunit III.
 
   
 0.949
AMS40587.1
Pfam:pfam00510 Cytochrome c oxidase subunit III.
 
   
 0.947
AMS40585.1
Cytochrome C oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
   
 0.912
AMS40584.1
Pfam:pfam00116 Cytochrome C oxidase subunit II, periplasmic domain.
 
   
 0.901
AMS41522.1
GYD family protein; Pfam:pfam08734 GYD domain.
 
     0.583
AMS40589.1
Cytochrome C.
       0.511
AMS41384.1
GYD family protein; Pfam:pfam08734 GYD domain.
 
     0.483
AMS43461.1
Hypothetical protein.
  
     0.442
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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