STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40631.1Hypothetical protein. (423 aa)    
Predicted Functional Partners:
AMS40630.1
SirA-like family protein; Pfam:pfam01206 Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family.
       0.845
AMS42326.1
Hypothetical protein.
  
     0.722
AMS39181.1
Pfam:pfam06620 Protein of unknown function (DUF1150).
  
    0.693
AMS43749.1
Pfam:pfam06776 Invasion associated locus B (IalB) protein.
  
     0.654
AMS40396.1
Pfam:pfam06282 Protein of unknown function (DUF1036).
  
     0.630
AMS43147.1
Hypothetical protein; Pfam:pfam10276 Zinc-finger domain.
  
     0.625
AMS41245.1
Flagellar export protein FliJ.
  
     0.602
AMS42358.1
Hypothetical protein; Pfam:pfam05128 Domain of unknown function (DUF697).
  
     0.589
AMS43627.1
Hypothetical protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
 
  
 0.583
AMS40799.1
Lipoprotein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
 
  
 0.582
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.