Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMS40645.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
AMS40803.1
Isomerase; Pfam:pfam12680 SnoaL-like domain.
  
     0.774
AMS43582.1
XRE family transcriptional regulator.
 
     0.758
AMS40644.1
Signal peptide protein; Pfam:pfam13449 Esterase-like activity of phytase.
       0.620
AMS40643.1
Cobalt chelatase; Pfam:pfam06213 Cobalamin biosynthesis protein CobT.
       0.616
AMS42408.1
Globin; Pfam:pfam01152 Bacterial-like globin.
  
     0.616
AMS40642.1
Pfam:pfam12556 Cobaltochelatase CobS subunit N terminal.
       0.600
AMS42016.1
Abortive infection protein.
 
    0.573
AMS43907.1
Amino acid ABC transporter substrate-binding protein; Pfam:pfam01094 Receptor family ligand binding region.
  
     0.527
AMS41631.1
Hypothetical protein; Pfam:pfam01636 Phosphotransferase enzyme family.
  
     0.517
AMS43581.1
Membrane protein.
 
     0.514
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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