Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40701.1MFS transporter; Pfam:pfam01844 HNH endonuclease. (185 aa)    
Predicted Functional Partners:
AMS44017.1
Conjugal transfer protein TraG; Pfam:pfam02534 Type IV secretory system Conjugative DNA transfer.
   
 
 0.632
AMS40700.1
DNA-3-methyladenine glycosidase; Pfam:pfam00730 HhH-GPD superfamily base excision DNA repair protein.
       0.604
AMS40699.1
Hypothetical protein; Pfam:pfam00749 tRNA synthetases class I (E and Q), catalytic domain; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.598
AMS41356.1
Hypothetical protein; Pfam:pfam10722 Putative bacterial sensory transduction regulator.
 
    0.586
AMS43722.1
Pfam:pfam01555 DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.583
AMS41172.1
Terminase; Pfam:pfam03354 Phage Terminase.
  
  
 0.580
AMS42480.1
Terminase; Pfam:pfam05119 Phage terminase, small subunit.
  
    0.553
AMS42263.1
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
    0.468
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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