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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40704.1Hypothetical protein. (205 aa)    
Predicted Functional Partners:
AMS42061.1
Hypothetical protein; Pfam:pfam14399 NlpC/p60-like transpeptidase.
  
     0.670
AMS38993.1
Hypothetical protein; Pfam:pfam13450 NAD(P)-binding Rossmann-like domain.
  
     0.632
AMS43139.1
NIPSNAP family containing protein; Pfam:pfam07978 NIPSNAP.
  
     0.608
AMS42114.1
Glyoxalase/bleomycin resistance protein/dioxygenase; Pfam:pfam12681 Glyoxalase-like domain.
  
     0.587
AMS40705.1
Hypothetical protein; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
       0.545
AMS42016.1
Abortive infection protein.
  
     0.545
AMS40452.1
Hypothetical protein; Pfam:pfam00583 Acetyltransferase (GNAT) family.
  
     0.508
AMS40168.1
Hypothetical protein.
  
     0.491
AMS42343.1
Cupin; Pfam:pfam07883 Cupin domain.
  
     0.468
AMS40703.1
Membrane protein.
       0.443
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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