Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40742.1Hypothetical protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain. (458 aa)    
Predicted Functional Partners:
AMS44051.1
Hypothetical protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
     0.655
AMS42718.1
ErfK/YbiS/YcfS/YnhG family protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
     0.577
AMS40743.1
Pfam:pfam01636 Phosphotransferase enzyme family.
       0.522
AMS39323.1
Hypothetical protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
     0.518
AMS39494.1
ErfK/YbiS/YcfS/YnhG protein; Pfam:pfam03734 L,D-transpeptidase catalytic domain.
  
     0.481
AMS40709.1
Hypothetical protein; Pfam:pfam13480 Acetyltransferase (GNAT) domain.
  
     0.470
AMS40741.1
Branched-chain amino acid transport system ATP-binding protein; Pfam:pfam04237 YjbR.
       0.467
AMS43804.1
ATP-binding protein; Pfam:pfam07486 Cell Wall Hydrolase.
  
     0.454
AMS41322.1
Hypothetical protein.
  
     0.436
AMS43570.1
Pfam:pfam09917 Uncharacterized protein conserved in bacteria (DUF2147).
  
     0.434
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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