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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40753.1Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. (663 aa)    
Predicted Functional Partners:
AMS40754.1
Hypothetical protein; Pfam:pfam00005 ABC transporter.
 
 0.997
AMS40755.1
Glycine/betaine ABC transporter substrate-binding protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system.
 
 
 0.991
AMS44313.1
Pfam:pfam00005 ABC transporter.
 0.989
AMS41299.1
Pfam:pfam00005 ABC transporter.
 
 0.986
AMS44312.1
Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system.
 
 
 0.982
AMS41297.1
Choline ABC transporter, periplasmic binding protein; Pfam:pfam04069 Substrate binding domain of ABC-type glycine betaine transport system.
 
 0.956
proW_2
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
  
 
0.916
AMS44314.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
  
 
0.907
AMS44315.1
Pfam:pfam01633 Choline/ethanolamine kinase.
 
     0.596
purN
Hypothetical protein; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
  
 0.428
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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