Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AMS40758.1Hypothetical protein. (355 aa)    
Predicted Functional Partners:
AMS40757.1
Hypothetical protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   
 0.843
AMS39558.1
Hypothetical protein; Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
    0.589
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
    
   0.576
AMS42161.1
Pfam:pfam11127 Protein of unknown function (DUF2892).
  
     0.505
AMS40759.1
Hypothetical protein; Pfam:pfam00072 Response regulator receiver domain.
     
 0.497
AMS39549.1
Sugar phosphate isomerase; Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
    0.485
AMS41531.1
Pfam:pfam02585 GlcNAc-PI de-N-acetylase.
  
   
 0.476
AMS43402.1
MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily.
  
  
 0.443
AMS41802.1
Ankyrin; Pfam:pfam12796 Ankyrin repeats (3 copies).
  
 0.434
AMS40756.1
Hypothetical protein; Pfam:pfam00072 Response regulator receiver domain.
     
 0.428
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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