Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40775.1Transporter; Pfam:pfam13407 Periplasmic binding protein domain. (343 aa)    
Predicted Functional Partners:
AMS42880.1
Hypothetical protein; Pfam:pfam13407 Periplasmic binding protein domain.
  
  
  0.944
AMS40773.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.938
AMS43231.1
Sugar ABC transporter substrate-binding protein; Pfam:pfam13407 Periplasmic binding protein domain.
  
  
  0.929
AMS40027.1
Hypothetical protein; Pfam:pfam13407 Periplasmic binding protein domain.
  
  
 
0.918
AMS39844.1
LacI family transcriptional regulator; Pfam:pfam13407 Periplasmic binding protein domain.
  
  
 
0.914
AMS39428.1
Sugar ABC transporter substrate-binding protein; Pfam:pfam13407 Periplasmic binding protein domain.
  
  
 
0.908
AMS40769.1
Aldolase; Pfam:pfam01791 DeoC/LacD family aldolase.
 
  
 0.897
rbsA-2
Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.875
AMS40772.1
Crp/Fnr family transcriptional regulator; Pfam:pfam04198 Putative sugar-binding domain.
 
  
 0.856
AMS40768.1
Xylulose kinase; Pfam:pfam00370 FGGY family of carbohydrate kinases, N-terminal domain; Belongs to the FGGY kinase family.
 
  
 0.844
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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