STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40780.1Pfam:pfam02615 Malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. (304 aa)    
Predicted Functional Partners:
AMS40779.1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
       0.781
AMS39291.1
Membrane protein; Pfam:pfam13593 SBF-like CPA transporter family (DUF4137).
 
    0.718
AMS40778.1
Taurine ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.717
AMS40777.1
Mannosyltransferase; Pfam:pfam00005 ABC transporter.
       0.713
AMS40781.1
palmitoyl-CoA hydrolase; Pfam:pfam08840 BAAT / Acyl-CoA thioester hydrolase C terminal.
  
    0.655
AMS39510.1
Zn-dependent dipeptidase, microsomal dipeptidase; Pfam:pfam01244 Membrane dipeptidase (Peptidase family M19).
  
    0.623
AMS39856.1
Peptidase; Pfam:pfam01244 Membrane dipeptidase (Peptidase family M19).
  
    0.623
AMS40776.1
ABC transporter substrate-binding protein; Pfam:pfam09084 NMT1/THI5 like.
       0.619
AMS40782.1
Pfam:pfam07920 Protein of unknown function (DUF1684).
       0.611
AMS40783.1
Hypothetical protein.
       0.415
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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