Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulokinase; Pfam:pfam00370 FGGY family of carbohydrate kinases, N-terminal domain. (483 aa)    
Predicted Functional Partners:
xylA
Pfam:pfam01261 Xylose isomerase-like TIM barrel; Belongs to the xylose isomerase family.
 
 
 0.989
AMS39424.1
Pfam:pfam00834 Ribulose-phosphate 3 epimerase family; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.933
AMS41536.1
Hypothetical protein.
  
   0.601
AMS39379.1
Class II aldolase/adducin family protein; Pfam:pfam00596 Class II Aldolase and Adducin N-terminal domain.
  
  
 0.555
AMS42294.1
Transcriptional regulator LacI family; Pfam:pfam13407 Periplasmic binding protein domain.
 
 
 
 0.548
AMS39236.1
Hypothetical protein; Pfam:pfam01261 Xylose isomerase-like TIM barrel.
  
 
 0.543
AMS40530.1
Sugar ABC transporter substrate-binding protein; Pfam:pfam13407 Periplasmic binding protein domain.
 
   
 0.532
AMS39151.1
Sugar ABC transporter substrate-binding protein; Pfam:pfam01547 Bacterial extracellular solute-binding protein.
 
   
 0.522
AMS41064.1
Hypothetical protein; Converts alpha-aldose to the beta-anomer.
 
  
 0.514
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.506
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (32%) [HD]