Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
xylAPfam:pfam01261 Xylose isomerase-like TIM barrel; Belongs to the xylose isomerase family. (436 aa)    
Predicted Functional Partners:
xylB
Xylulokinase; Pfam:pfam00370 FGGY family of carbohydrate kinases, N-terminal domain.
 
 
 0.989
AMS39146.1
Pfam:pfam08125 Mannitol dehydrogenase C-terminal domain.
    
 0.946
AMS43660.1
Carbohydrate kinase; Pfam:pfam00294 pfkB family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.931
AMS41063.1
3-oxoacyl-ACP reductase; Pfam:pfam00106 short chain dehydrogenase.
     
 0.903
glk
Glucokinase; Pfam:pfam02685 Glucokinase; Belongs to the bacterial glucokinase family.
     
 0.823
AMS40530.1
Sugar ABC transporter substrate-binding protein; Pfam:pfam13407 Periplasmic binding protein domain.
 
  
 0.746
AMS41064.1
Hypothetical protein; Converts alpha-aldose to the beta-anomer.
 
  
 0.631
AMS40531.1
Sugar ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.626
AMS40768.1
Xylulose kinase; Pfam:pfam00370 FGGY family of carbohydrate kinases, N-terminal domain; Belongs to the FGGY kinase family.
  
  
 0.579
AMS42294.1
Transcriptional regulator LacI family; Pfam:pfam13407 Periplasmic binding protein domain.
 
   
 0.527
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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