Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40809.1NADPH dependend quinone reductase; Pfam:pfam05853 Prokaryotic protein of unknown function (DUF849). (305 aa)    
Predicted Functional Partners:
lcdH
L-carnitine dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
 
  
 0.953
AMS39570.1
Cyclase; Pfam:pfam04199 Putative cyclase.
  
  
 0.769
AMS40811.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
     0.768
AMS41764.1
Thioesterase; Pfam:pfam13279 Thioesterase-like superfamily.
 
  
 0.735
AMS40812.1
Hypothetical protein; Pfam:pfam13549 ATP-grasp domain.
 
     0.712
AMS42603.1
Hypothetical protein; Pfam:pfam13279 Thioesterase-like superfamily.
 
  
 0.701
AMS40808.1
AraC family transcriptional regulator; Pfam:pfam13278 Putative amidotransferase.
 
     0.677
AMS39379.1
Class II aldolase/adducin family protein; Pfam:pfam00596 Class II Aldolase and Adducin N-terminal domain.
 
     0.666
AMS40813.1
carnitinyl-CoA dehydratase; Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
 
     0.636
AMS44171.1
MerR family transcriptional regulator; Pfam:pfam01381 Helix-turn-helix.
  
    0.544
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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