Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40812.1Hypothetical protein; Pfam:pfam13549 ATP-grasp domain. (709 aa)    
Predicted Functional Partners:
AMS40813.1
carnitinyl-CoA dehydratase; Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
 
    0.901
AMS40811.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 
  0.879
AMS40809.1
NADPH dependend quinone reductase; Pfam:pfam05853 Prokaryotic protein of unknown function (DUF849).
 
     0.712
lcdH
L-carnitine dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
 
    0.699
AMS44287.1
Methyltransferase; Pfam:pfam06253 Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family.
  
     0.663
AMS39379.1
Class II aldolase/adducin family protein; Pfam:pfam00596 Class II Aldolase and Adducin N-terminal domain.
 
     0.646
AMS40814.1
Lipase/esterase; Pfam:pfam07859 alpha/beta hydrolase fold.
       0.554
AMS41286.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
   
 
  0.508
AMS41972.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
   
 
  0.508
AMS42559.1
Hypothetical protein; Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
   
 
  0.508
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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