Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS40820.1Cytidine deaminase. (197 aa)    
Predicted Functional Partners:
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
       0.842
AMS40822.1
Allantoin catabolism protein; Pfam:pfam07883 Cupin domain.
       0.833
AMS40823.1
Polysaccharide deacetylase; Pfam:pfam09349 OHCU decarboxylase.
       0.771
hisE
Pfam:pfam01503 Phosphoribosyl-ATP pyrophosphohydrolase.
   
  
 0.610
AMS40824.1
5-hydroxyisourate hydrolase; Pfam:pfam00576 HIUase/Transthyretin family; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
     
 0.530
AMS40826.1
Aldehyde oxidase; Pfam:pfam02738 Molybdopterin-binding domain of aldehyde dehydrogenase.
     
 0.514
AMS41818.1
Endonuclease.
 
     0.511
AMS40825.1
Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.
       0.495
AMS41866.1
Biotin; Pfam:pfam03099 Biotin/lipoate A/B protein ligase family.
  
    0.491
AMS40827.1
Hypothetical protein; Pfam:pfam13478 XdhC Rossmann domain.
       0.483
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.