STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40832.1Cysteine desulfurase; Pfam:pfam06181 Protein of unknown function (DUF989). (406 aa)    
Predicted Functional Partners:
AMS40833.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.866
AMS40823.1
Polysaccharide deacetylase; Pfam:pfam09349 OHCU decarboxylase.
 
    0.854
AMS39557.1
Hypothetical protein; Pfam:pfam09349 OHCU decarboxylase.
 
    0.850
AMS40824.1
5-hydroxyisourate hydrolase; Pfam:pfam00576 HIUase/Transthyretin family; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.842
allA
Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
 
    0.820
AMS41567.1
Pfam:pfam04115 Ureidoglycolate hydrolase.
 
    0.796
AMS40827.1
Hypothetical protein; Pfam:pfam13478 XdhC Rossmann domain.
 
     0.752
AMS40825.1
Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.
 
     0.713
AMS40826.1
Aldehyde oxidase; Pfam:pfam02738 Molybdopterin-binding domain of aldehyde dehydrogenase.
 
     0.713
AMS40831.1
LysR family transcriptional regulator; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
 
     0.599
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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