Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40837.1Biotin synthase; Pfam:pfam04055 Radical SAM superfamily. (412 aa)    
Predicted Functional Partners:
AMS40836.1
Hypothetical protein; Pfam:pfam13566 Domain of unknown function (DUF4130.
 
    0.955
AMS39298.1
General stress protein.
 
     0.644
AMS40540.1
Histidine kinase.
  
     0.623
AMS40838.1
Pfam:pfam00120 Glutamine synthetase, catalytic domain.
       0.515
AMS44243.1
Pfam:pfam01068 ATP dependent DNA ligase domain.
 
     0.485
AMS40001.1
Pfam:pfam01028 Eukaryotic DNA topoisomerase I, catalytic core.
 
     0.468
AMS44242.1
Beta-lactamase.
 
     0.464
AMS40839.1
Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.458
AMS40536.1
Pfam:pfam07536 HWE histidine kinase.
  
     0.415
AMS44239.1
Helicase; Pfam:pfam08494 DEAD/H associated.
 
   
 0.412
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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