STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40855.1C4-dicarboxylate ABC transporter; Pfam:pfam06808 DctM-like transporters. (588 aa)    
Predicted Functional Partners:
AMS40856.1
C4-dicarboxylate ABC transporter; Pfam:pfam04290 Tripartite ATP-independent periplasmic transporters, DctQ component.
 
 
 0.995
AMS40852.1
ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.804
AMS40853.1
Family 7 extracellular solute-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.804
AMS40078.1
Hypothetical protein; Pfam:pfam03480 Bacterial extracellular solute-binding protein, family 7.
 
   
 0.779
AMS40895.1
C4-dicarboxylate ABC transporter permease; Pfam:pfam04290 Tripartite ATP-independent periplasmic transporters, DctQ component.
 
  
 0.660
AMS40083.1
TRAP transporter-DctP subunit; Pfam:pfam03480 Bacterial extracellular solute-binding protein, family 7.
   
 0.656
AMS43262.1
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family; Pfam:pfam03480 Bacterial extracellular solute-binding protein, family 7.
   
 0.613
AMS40897.1
C4-dicarboxylate ABC transporter; Pfam:pfam03480 Bacterial extracellular solute-binding protein, family 7.
 
  
 0.499
AMS40857.1
Hypothetical protein; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
  
    0.455
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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