Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS40870.1Pfam:pfam06186 Protein of unknown function (DUF992). (158 aa)    
Predicted Functional Partners:
AMS40872.1
GlcNAc transferase; Pfam:pfam13414 TPR repeat.
 
     0.654
AMS42942.1
Pfam:pfam11003 Protein of unknown function (DUF2842).
  
     0.652
AMS43729.1
Hypothetical protein.
  
     0.608
AMS40871.1
Hypothetical protein; Pfam:pfam02525 Flavodoxin-like fold.
       0.578
AMS42326.1
Hypothetical protein.
  
     0.554
AMS40396.1
Pfam:pfam06282 Protein of unknown function (DUF1036).
  
     0.485
AMS40518.1
25 kDa outer-membrane immunogenic protein; Pfam:pfam13505 Outer membrane protein beta-barrel domain.
  
     0.484
AMS38985.1
Hypothetical protein.
  
     0.464
AMS40869.1
Lysine transporter LysE; Pfam:pfam01810 LysE type translocator.
       0.463
AMS41250.1
Hypothetical protein.
  
     0.460
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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