Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS40884.1Pfam:pfam04267 Sarcosine oxidase, delta subunit family. (126 aa)    
Predicted Functional Partners:
AMS40885.1
Sarcosine oxidase subunit alpha; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
 
 0.999
AMS40886.1
Pfam:pfam04268 Sarcosine oxidase, gamma subunit family.
 
 0.999
AMS40882.1
Sarcosine oxidase subunit beta; Pfam:pfam01266 FAD dependent oxidoreductase.
 
 0.997
AMS41964.1
Glycine cleavage system protein T; Pfam:pfam01266 FAD dependent oxidoreductase; Belongs to the GcvT family.
 
 0.986
AMS41897.1
Dimethylglycine dehydrogenase; Pfam:pfam01266 FAD dependent oxidoreductase; Belongs to the GcvT family.
 
 0.984
AMS41906.1
(2Fe-2S)-binding protein; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
 
 
 0.974
AMS41905.1
Pfam:pfam04268 Sarcosine oxidase, gamma subunit family.
 
 
 0.937
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
  0.910
glyA-2
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
  0.910
AMS39128.1
Rieske (2Fe-2S) protein; Pfam:pfam00848 Ring hydroxylating alpha subunit (catalytic domain).
 
    0.906
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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