STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40908.1Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily. (332 aa)    
Predicted Functional Partners:
AMS40909.1
Spermidine/putrescine ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.968
AMS40910.1
Spermidine/putrescine ABC transporter permease.
 
  
 0.965
AMS40907.1
Spermidine/putrescine ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.
 
  
 0.887
AMS39101.1
Spermidine/putrescine ABC transporter, permease protein.
 
 
 0.833
AMS41052.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.830
AMS41053.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.822
AMS41116.1
Putrescine ABC transport system permease protein PotH.
 
 
 0.812
AMS39386.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.811
AMS39591.1
Spermidine/putrescine ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.803
ydcV_6
Putative spermidine/putrescine ABC transporter, permease protein.
 
  
 0.800
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.