STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS40934.1GntR family transcriptional regulator; Pfam:pfam07729 FCD domain. (246 aa)    
Predicted Functional Partners:
AMS39575.1
Hypothetical protein; Pfam:pfam07729 FCD domain.
  
     0.753
AMS40129.1
Pfam:pfam07729 FCD domain.
  
  
 0.753
AMS40106.1
Hypothetical protein; Pfam:pfam07729 FCD domain.
  
  
 0.689
AMS43858.1
GntR domain protein; Pfam:pfam07729 FCD domain.
  
  
 0.654
AMS39530.1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
  
  
 0.625
AMS41947.1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
  
  
 0.555
AMS40933.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
       0.532
AMS44062.1
GntR family transcriptional regulator; Pfam:pfam07729 FCD domain.
  
  
 0.522
AMS39838.1
Pfam:pfam01177 Asp/Glu/Hydantoin racemase.
 
     0.446
AMS40053.1
Pfam:pfam01177 Asp/Glu/Hydantoin racemase.
 
     0.446
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.