STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40937.1AraC family transcriptional regulator; Pfam:pfam14525 AraC-binding-like domain. (333 aa)    
Predicted Functional Partners:
AMS40939.1
Monooxygenase; Pfam:pfam00743 Flavin-binding monooxygenase-like.
 
     0.782
qdoI_1
Cupin; Pfam:pfam07883 Cupin domain.
 
   0.761
AMS39567.1
Indolepyruvate oxidoreductase subunit IorB II; Pfam:pfam01558 Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
     0.696
AMS39570.1
Cyclase; Pfam:pfam04199 Putative cyclase.
  
     0.683
AMS39566.1
Indolepyruvate oxidoreductase subunit IorA; Pfam:pfam02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
  
     0.681
AMS43882.1
Cupin 2, conserved barrel domain protein; Pfam:pfam07883 Cupin domain.
 
     0.544
AMS40936.1
Hypothetical protein.
       0.524
nbaC
3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate.
 
   0.457
AMS41574.1
AraC family transcriptional regulator; Pfam:pfam13278 Putative amidotransferase.
 
 
 0.442
AMS43000.1
AraC family transcriptional regulator; Pfam:pfam13278 Putative amidotransferase.
 
 
 0.438
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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