STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40939.1Monooxygenase; Pfam:pfam00743 Flavin-binding monooxygenase-like. (495 aa)    
Predicted Functional Partners:
qdoI_1
Cupin; Pfam:pfam07883 Cupin domain.
 
     0.844
AMS40937.1
AraC family transcriptional regulator; Pfam:pfam14525 AraC-binding-like domain.
 
     0.782
AMS43882.1
Cupin 2, conserved barrel domain protein; Pfam:pfam07883 Cupin domain.
 
     0.752
AMS39567.1
Indolepyruvate oxidoreductase subunit IorB II; Pfam:pfam01558 Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
   
 0.626
AMS39566.1
Indolepyruvate oxidoreductase subunit IorA; Pfam:pfam02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
  
   
 0.542
AMS39570.1
Cyclase; Pfam:pfam04199 Putative cyclase.
 
     0.507
AMS39563.1
Hypothetical protein; Pfam:pfam00067 Cytochrome P450.
 
 
 0.480
AMS43373.1
Pfam:pfam01545 Cation efflux family.
  
    0.424
AMS42895.1
Pfam:pfam00701 Dihydrodipicolinate synthetase family; Belongs to the DapA family.
  
   
 0.420
AMS43531.1
Pfam:pfam07690 Major Facilitator Superfamily.
  
     0.406
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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