STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40948.1Pfam:pfam14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster. (484 aa)    
Predicted Functional Partners:
AMS40947.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
 0.999
AMS39857.1
Pfam:pfam00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.925
carB
Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain; Belongs to the CarB family.
  
 
 0.919
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.918
AMS40838.1
Pfam:pfam00120 Glutamine synthetase, catalytic domain.
  
 
 0.917
AMS40898.1
Pfam:pfam00120 Glutamine synthetase, catalytic domain.
  
 
 0.917
AMS42676.1
Pfam:pfam00120 Glutamine synthetase, catalytic domain.
  
 
 0.917
AMS42683.1
Pfam:pfam00120 Glutamine synthetase, catalytic domain.
  
 
 0.917
AMS44101.1
Pfam:pfam00120 Glutamine synthetase, catalytic domain.
  
 
 0.917
AMS40188.1
Pfam:pfam05088 Bacterial NAD-glutamate dehydrogenase.
     
 0.914
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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