Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMS40953.1Pfam:pfam10082 Uncharacterized protein conserved in bacteria (DUF2320). (561 aa)    
Predicted Functional Partners:
AMS42945.1
Exopolysaccharide transporter; Pfam:pfam02706 Chain length determinant protein.
 
   
 0.801
AMS40709.1
Hypothetical protein; Pfam:pfam13480 Acetyltransferase (GNAT) domain.
 
     0.767
AMS42944.1
Hypothetical protein; Pfam:pfam13480 Acetyltransferase (GNAT) domain.
 
     0.742
AMS44357.1
Transporter.
  
     0.730
AMS42949.1
Membrane protein.
 
     0.715
AMS40343.1
AraC family transcriptional regulator; Pfam:pfam07323 Protein of unknown function (DUF1465).
  
     0.710
AMS41768.1
Pfam:pfam13502 AsmA-like C-terminal region.
  
     0.707
AMS41322.1
Hypothetical protein.
  
     0.704
AMS44236.1
Hypothetical protein; Pfam:pfam01471 Putative peptidoglycan binding domain.
  
    0.697
AMS44399.1
Pfam:pfam09476 Pilus biogenesis CpaD protein (pilus_cpaD).
  
     0.697
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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