Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMS40955.1 | AMS40956.1 | AA2016_2025 | AA2016_2026 | Hypothetical protein; Pfam:pfam05977 Transmembrane secretion effector. | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | 0.537 |
AMS40956.1 | AMS40955.1 | AA2016_2026 | AA2016_2025 | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | Hypothetical protein; Pfam:pfam05977 Transmembrane secretion effector. | 0.537 |
AMS40956.1 | AMS40957.1 | AA2016_2026 | AA2016_2027 | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | Membrane protein; Pfam:pfam01957 NfeD-like C-terminal, partner-binding. | 0.503 |
AMS40956.1 | qmcA | AA2016_2026 | AA2016_2028 | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | Membrane protein; Pfam:pfam01145 SPFH domain / Band 7 family. | 0.446 |
AMS40957.1 | AMS40956.1 | AA2016_2027 | AA2016_2026 | Membrane protein; Pfam:pfam01957 NfeD-like C-terminal, partner-binding. | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | 0.503 |
AMS40957.1 | qmcA | AA2016_2027 | AA2016_2028 | Membrane protein; Pfam:pfam01957 NfeD-like C-terminal, partner-binding. | Membrane protein; Pfam:pfam01145 SPFH domain / Band 7 family. | 0.950 |
qmcA | AMS40956.1 | AA2016_2028 | AA2016_2026 | Membrane protein; Pfam:pfam01145 SPFH domain / Band 7 family. | Pfam:pfam00440 Bacterial regulatory proteins, tetR family. | 0.446 |
qmcA | AMS40957.1 | AA2016_2028 | AA2016_2027 | Membrane protein; Pfam:pfam01145 SPFH domain / Band 7 family. | Membrane protein; Pfam:pfam01957 NfeD-like C-terminal, partner-binding. | 0.950 |