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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qmcAMembrane protein; Pfam:pfam01145 SPFH domain / Band 7 family. (316 aa)    
Predicted Functional Partners:
AMS40957.1
Membrane protein; Pfam:pfam01957 NfeD-like C-terminal, partner-binding.
 
  
 0.950
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.897
AMS41781.1
Modulator for HflB protease specific for phage lambda cII repressor; HflC and HflK could encode or regulate a protease.
  
   
 0.532
AMS40959.1
Pfam:pfam01266 FAD dependent oxidoreductase.
  
    0.528
AMS43734.1
Hypothetical protein; Pfam:pfam02622 Uncharacterized ACR, COG1678; Belongs to the UPF0301 (AlgH) family.
  
    0.514
AMS39946.1
Nucleotidyltransferase; Pfam:pfam10127 Predicted nucleotidyltransferase.
  
  
 0.512
AMS43116.1
Hypothetical protein; Pfam:pfam05193 Peptidase M16 inactive domain.
  
 0.503
AMS40692.1
Hypothetical protein; Pfam:pfam01694 Rhomboid family.
   
 0.501
AMS42215.1
Pfam:pfam01694 Rhomboid family.
   
 0.501
AMS43117.1
Zinc protease; Pfam:pfam05193 Peptidase M16 inactive domain.
  
 0.488
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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