STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40963.1PTS galactitol transporter subunit IIC; Pfam:pfam03611 PTS system sugar-specific permease component. (478 aa)    
Predicted Functional Partners:
AMS40965.1
PTS galactitol transporter subunit IIB.
 
 
 0.995
AMS40964.1
PTS sugar transporter subunit IIA; Pfam:pfam00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
 
 0.994
AMS39702.1
Hypothetical protein; Pfam:pfam00381 PTS HPr component phosphorylation site.
  
 
  0.909
AMS39147.1
Pfam:pfam00106 short chain dehydrogenase.
    
  0.902
AMS41644.1
Homoserine dehydrogenase; Pfam:pfam08666 SAF domain.
 
     0.689
AMS41577.1
Hypothetical protein; Pfam:pfam03437 BtpA family.
  
    0.606
AMS40283.1
Hypothetical protein; Pfam:pfam00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
  
 0.520
AMS39182.1
Nitrogen regulatory protein; Pfam:pfam00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
  
 0.519
AMS43265.1
Hypothetical protein; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
     0.500
AMS40772.1
Crp/Fnr family transcriptional regulator; Pfam:pfam04198 Putative sugar-binding domain.
 
     0.477
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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