STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS40963.1PTS galactitol transporter subunit IIC; Pfam:pfam03611 PTS system sugar-specific permease component. (478 aa)    
Predicted Functional Partners:
AMS40965.1
PTS galactitol transporter subunit IIB.
 
 
 0.995
AMS40964.1
PTS sugar transporter subunit IIA; Pfam:pfam00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
 
 0.993
AMS39147.1
Pfam:pfam00106 short chain dehydrogenase.
  
 
  0.940
AMS39702.1
Hypothetical protein; Pfam:pfam00381 PTS HPr component phosphorylation site.
  
 
 0.917
AMS41644.1
Homoserine dehydrogenase; Pfam:pfam08666 SAF domain.
 
     0.689
AMS39104.1
Amidase; Pfam:pfam01425 Amidase.
   
    0.621
AMS39279.1
Amidase; Pfam:pfam01425 Amidase; Belongs to the amidase family.
   
    0.621
AMS40992.1
Amidase; Pfam:pfam01425 Amidase; Belongs to the amidase family.
   
    0.621
AMS41648.1
Amidase; Pfam:pfam01425 Amidase; Belongs to the amidase family.
   
    0.621
gatA
glutamyl-tRNA amidotransferase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
   
    0.621
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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