STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41048.1Acetylpolyamine aminohydrolase; Pfam:pfam00850 Histone deacetylase domain. (343 aa)    
Predicted Functional Partners:
AMS41049.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
       0.732
AMS39773.1
Amine oxidase; Pfam:pfam01593 Flavin containing amine oxidoreductase.
   
 0.575
AMS41986.1
Flavin monoamine oxidase; Pfam:pfam01593 Flavin containing amine oxidoreductase.
   
 0.575
AMS41293.1
ATPase AAA; Pfam:pfam00004 ATPase family associated with various cellular activities (AAA).
   
 0.554
AMS40143.1
Hypothetical protein.
    
 0.552
AMS40843.1
Hypothetical protein.
    
 0.552
AMS43288.1
Cysteine desulfurase; Pfam:pfam12796 Ankyrin repeats (3 copies).
  
 0.509
AMS40087.1
Pfam:pfam02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
 
 
 0.501
AMS40138.1
Hypothetical protein; Pfam:pfam13020 Domain of unknown function (DUF3883).
    
 0.478
AMS40140.1
Hypothetical protein; Pfam:pfam00176 SNF2 family N-terminal domain.
    
 0.478
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.