STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41063.13-oxoacyl-ACP reductase; Pfam:pfam00106 short chain dehydrogenase. (256 aa)    
Predicted Functional Partners:
AMS43815.1
Hypothetical protein; Pfam:pfam08450 SMP-30/Gluconolaconase/LRE-like region.
  
 
 0.904
xylA
Pfam:pfam01261 Xylose isomerase-like TIM barrel; Belongs to the xylose isomerase family.
     
 0.903
AMS41062.1
GguC protein; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family.
 
     0.812
AMS40069.1
Short-chain dehydrogenase/reductase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
     0.675
AMS41060.1
Pfam:pfam00005 ABC transporter.
       0.462
AMS41061.1
Inner-membrane translocator; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.462
AMS40963.1
PTS galactitol transporter subunit IIC; Pfam:pfam03611 PTS system sugar-specific permease component.
  
    0.428
AMS43446.1
ACP S-malonyltransferase; Pfam:pfam00698 Acyl transferase domain.
  
 
 0.426
AMS40979.1
3-oxoacyl-ACP reductase; Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.416
AMS39652.1
Hypothetical protein; Pfam:pfam05035 2-keto-3-deoxy-galactonokinase.
 
     0.401
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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