STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41064.1Hypothetical protein; Converts alpha-aldose to the beta-anomer. (339 aa)    
Predicted Functional Partners:
AMS42660.1
Hypothetical protein; Pfam:pfam00480 ROK family.
 
  
 0.924
AMS39653.1
3-oxoacyl-ACP reductase; Pfam:pfam00106 short chain dehydrogenase.
 
 
 0.918
glk
Glucokinase; Pfam:pfam02685 Glucokinase; Belongs to the bacterial glucokinase family.
    
 0.914
AMS43854.1
Pfam:pfam01263 Aldose 1-epimerase.
     
  0.900
AMS44193.1
UDP-glucose 4-epimerase; Pfam:pfam01370 NAD dependent epimerase/dehydratase family; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.882
xylA
Pfam:pfam01261 Xylose isomerase-like TIM barrel; Belongs to the xylose isomerase family.
 
  
 0.629
AMS41065.1
Ferredoxin reductase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
  
  
 0.538
ndoA
MocE; Pfam:pfam00355 Rieske [2Fe-2S] domain.
       0.487
xylB
Xylulokinase; Pfam:pfam00370 FGGY family of carbohydrate kinases, N-terminal domain.
 
  
 0.476
AMS41651.1
Oxidoreductase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.475
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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