STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41067.1Pfam:pfam00487 Fatty acid desaturase. (362 aa)    
Predicted Functional Partners:
ndoA
MocE; Pfam:pfam00355 Rieske [2Fe-2S] domain.
    0.989
AMS41068.1
LacI family transcriptional regulator; Pfam:pfam13407 Periplasmic binding protein domain.
 
    0.878
AMS41069.1
Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
     0.766
AMS41065.1
Ferredoxin reductase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
 
   
 0.757
AMS41076.1
Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
     0.514
AMS41070.1
Pfam:pfam13407 Periplasmic binding protein domain.
 
    0.503
AMS43518.1
Transcriptional regulator, repressor protein MphR(A).
  
    0.495
AMS41073.1
Inositol 2-dehydrogenase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
     0.464
AMS41064.1
Hypothetical protein; Converts alpha-aldose to the beta-anomer.
       0.445
AMS41074.1
5-dehydro-2-deoxygluconokinase; Pfam:pfam09863 Uncharacterized protein conserved in bacteria (DUF2090).
 
   
 0.443
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.